PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_4DS_FE97492F2.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 203aa    MW: 22509.1 Da    PI: 9.4191
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_4DS_FE97492F2.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.2e-114098563
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                           kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l+ e+
  Traes_4DS_FE97492F2.1 40 KRAKRILANRQSAARSKERKIKYTGELERKVQTLQTEATTLSAQLTLLQRDTSGLTVEN 98
                           9*********************************************9999888887776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-1536100IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.70338101IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.25E-114091No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-114094No hitNo description
PfamPF001702.4E-94094IPR004827Basic-leucine zipper domain
CDDcd147031.17E-214190No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MDGASSPSDG ESALSGGLPD YAKKAIPAER LAELALLDPK RAKRILANRQ SAARSKERKI  60
KYTGELERKV QTLQTEATTL SAQLTLLQRD TSGLTVENRE LKLRLQSMEE QAKLRDALND  120
ALREEVQRLK IAAGQVPNMN GNPFGGGLQQ HQQQQQQIPN YFSQQQMHYQ GHPHHHPQNH  180
SQNSSNGGQS LSGQSLSDSM DFM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF7524310.0KF752431.1 Triticum aestivum cultivar CB037 VIP1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015618202.11e-107PREDICTED: transcription factor VIP1
SwissprotQ9MA751e-57VIP1_ARATH; Transcription factor VIP1
TrEMBLW5EU331e-147W5EU33_WHEAT; Uncharacterized protein
STRINGMLOC_71198.11e-109(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.12e-43VIRE2-interacting protein 1
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]